Module: secstruct

tdb

Members

class BioHelpers_FABER.secstruct.SecondaryStructure(pdbid: str, sequence: str, branot: str)

Class to represent a secondary structure for a given molecule

getContactList() → list[list[int]]

Returns contacts

Returns:

Contacts as list

Return type:

list[list[int]]

static loadFromFile(filename: str) → SecondaryStructure

Load Function for a Secondary Structure File, for the filetype see Documentation

Parameters:

filename (str) – path and filename of the secondary structure file

Returns:

Object of the new Secondary Structure

Return type:

SecondaryStructure